Step by step install of JIRA on Orion,IBM JAVA,MYSQL on Red Hat 4x

Added by Nick Menere, last edited by Nick Menere on Jan 17, 2006

Step by step install of JIRA on Orion/IBM JAVA/MYSQL on Red Hat 4x

This document will help you setup an Orion, IBM java, MySQL, and Jira server with the followig packages on a Red Hat AS 4.2 x86 server running under the orion user account.

Required Files

The following files are required:

  • atlassian-jira-enterprise-3.4.3.tar.gz
  • mysql-connector-java-3.1.12.tar.gz
  • orion2.0.5.zip
  • IBMJava2-142-ia32-SDK-1.4.2-3.0.i386.rpm

Steps

Create user and group

groupadd orion
useradd -g orion orion

Setup the environment

vi /etc/profile

Set a few environmental variables for Orion, and IBM Java

export ORION_DIR=/opt/orion
export ORION_LIBDIR=/usr/share/orion
export JAVA_HOME=/opt/IBMJava2-142
export JAVAC=$JAVA_HOME/bin/javac
export JDK_HOME=$JAVA_HOME
export CLASSPATH=$ORION_LIBDIR/activation.jar:$ORION_LIBDIR/admin.jar:$ORION_LIBDIR/applicationlauncher.jar:$ORION_LIBDIR/assemblerlauncher.jar:$ORION_LIBDIR/autoupdate.jar:$ORION_LIBDIR/clientassembler.jar:$ORION_LIBDIR/crimson.jar:$ORION_LIBDIR/earassembler.jar:$ORION_LIBDIR/ejb.jar:$ORION_LIBDIR/ejbassembler.jar:$ORION_LIBDIR/ejbmaker.jar:$ORION_LIBDIR/jaas.jar:$ORION_LIBDIR/jaxp.jar:$ORION_LIBDIR/jcert.jar:$ORION_LIBDIR/jdbc.jar:$ORION_LIBDIR/jndi.jar:$ORION_LIBDIR/jnet.jar:$ORION_LIBDIR/jsse.jar:$ORION_LIBDIR/jta.jar:$ORION_LIBDIR/loadbalancer.jar:$ORION_LIBDIR/mail.jar:$ORION_LIBDIR/orion.jar:$ORION_LIBDIR/orionconsole.jar:$ORION_LIBDIR/parser.jar:$ORION_LIBDIR/taglibassembler.jar:$ORION_LIBDIR/webappassembler.jar:$ORION_LIBDIR/xalan.jar:$ORION_LIBDIR/xerces.jar:$JAVA_HOME/lib/tools.jar

IBM Java

rpm -ivh IBMJava2-142-ia32-SDK-1.4.2-3.0.i386.rpm

Remove rh as 4.2 java

rpm -qa | grep -i java

(output)
java-1.4.2-gcj-compat-1.4.2.0-27jpp
IBMJava2-142-ia32-SDK-1.4.2-3.0
gcc-java-3.4.4-2

rpm -e java-1.4.2-gcj-compat-1.4.2.0-27jpp gcc-java-3.4.4-2

Install Orion

cp orion2.0.5.zip /opt/

unzip orion2.0.5.zip

mkdir /opt/orion/sbin
chown orion.orion /opt/orion/sbin

Make startup script.

vi /opt/orion/sbin/start_orion.sh

#!/bin/bash

#Start Orion Server

# Orion's User
ORION_USER=orion

# STDERR Log Location
ORION_ERR=/var/log/orion/stderr.log

# STDOUT Log Location
ORION_OUT=/var/log/orion/stdout.log

cd $ORION_DIR
$JAVA_HOME/bin/java -jar /opt/orion/orion.jar -config /opt/orion/config/server.xml -userThreads -quiet -out $ORION_OUT -err $ORION_ERR &

Make shutdown script. 

vi /opt/orion/sbin/stop_orion.sh

#!/bin/bash

ps auxww | grep orion.jar | awk '{print $2}' | xargs kill &> /dev/null

Make logs

mkdir /var/log/orion
chown orion.orion /var/log/orion

vi /var/log/orion/stderr.log

#STDERR LOG


vi /var/log/orion/stdout.log

#STDOUT LOG

Set orion to run on port 8081

vi /opt/orion/config/default-web-site.xml

Change line 

<web-site host="[ALL]" port="80" display-name="Default Orion WebSite">

to:

<web-site host="[ALL]" port="8081" display-name="Default Orion WebSite">

Copy over the tools.jar to the /opt orion directory

cp /opt/IBMJava2-142/lib/tools.jar /opt/orion/

Set permissions

chown orion.orion /var/log/orion/stdout.log
chown orion.orion /var/log/orion/stderr.log
chmod 777 /var/log/orion/stdout.log
chmod 777 /var/log/orion/stderr.log

chown orion.orion /opt/orion -R

chmod 777 /opt/orion/sbin/*.sh

Actual setup of Orion server (admin password)

logout and login for environment variable to be set so you can run the installer.

su - orion
cd /opt/orion

$JAVA_HOME/bin/java -jar /opt/orion/orion.jar -config /opt/orion/config/server.xml -install
Enter an admin password to use: orion
Confirm admin password: orion
Installation done

exit (to get back to root).

Startup script for reboot

vi /etc/rc.local

#Start Orion Server
su - orion -c /opt/orion/sbin/start_orion.sh

CREATE JIRA DATABASE IN MYSQL (jiradb)

mysql -u root -p
enter the "password"
use mysql;
INSERT INTO db 
(host,db,user,Select_priv,Insert_priv,Update_priv,Delete_priv,Create_priv,Drop_priv) 
values ('localhost','jiradb','root','Y','Y','Y','Y','Y','Y');
#now type

quit

mysqladmin -u root -p create jiradb



#GRANT JIRAUSER access to the JIRADB DATABASE (add localhost and the servers FNQD to the mysql grant listed below)

mysql -u root -p
enter the "password"
use mysql;

mysql> GRANT SELECT,INSERT,UPDATE,DELETE,CREATE,DROP,ALTER,INDEX on
  jiradb.* TO 'jirauser'@'localhost' IDENTIFIED BY 'password';
Query OK, 0 rows affected (0.00 sec)

mysql> flush privileges;
Query OK, 0 rows affected (0.00 sec)

mysql> quit
Bye



#NOW TEST JIRAUSER ACCESS TO JIRADB DATABASE

mysql --user=jirauser --password=password --database=jiradb


#YOU SHOULD SEE


Welcome to the MySQL monitor.  Commands end with ; or \g.
Your MySQL connection id is 2 to server version: 4.1.12

Type 'help;' or '\h' for help. Type '\c' to clear the buffer.

mysql> 


#TO EXIT MYSQL TYPE

mysql> exit
Bye

INSTALL MYSQL CONNECTOR for ORION:

cp mysql-connector-java-3.1.12.tar.gz /opt
cd /opt
tar -zxvf mysql-connector-java-3.1.12.tar.gz
cp /opt/mysql-connector-java-3.1.12/mysql-connector-java-3.1.12-bin.jar /opt/orion/lib/

JIRA INSTALL

cp atlassian-jira-enterprise-3.4.3.tar.gz /opt/
cd /opt
tar -zxvf atlassian-jira-enterprise-3.4.3.tar.gz
mv atlassian-jira-enterprise-3.4.3 jira
cd jira

Edit entityengine.xml

vi /opt/jira/edit-webapp/WEB-INF/classes/entityengine.xml

    <datasource name="defaultDS" field-type-name="mysql"
        helper-class="org.ofbiz.core.entity.GenericHelperDAO"
      check-on-start="true"
      use-foreign-keys="false"
      use-foreign-key-indices="false"
      check-fks-on-start="false"
      check-fk-indices-on-start="false"
      add-missing-on-start="true"
      check-indices-on-start="true">
        <jndi-jdbc jndi-server-name="default" jndi-name="jdbc/JiraDS"/>

CONFIGURE ORION TO USE JIRA

cd /opt/orion/config



#application.xml 

vi application.xml

<web-module id="jira" path="../../../opt/jira/dist-generic" />



#data-sources.xml 

vi data-sources.xml


        <data-source
                class="com.evermind.sql.DriverManagerDataSource"
                name="Jira Database"
                location="jdbc/JiraCoreDS"
                xa-location="jdbc/xa/JiraXADS"
                ejb-location="jdbc/JiraDS"
                connection-driver="com.mysql.jdbc.Driver"
                username="jirauser"
                password="password"
                url="jdbc:mysql://localhost/jiradb?autoReconnect=true"
                inactivity-timeout="30"
	/>

Edit default-web-site.xml 

vi default-web-site.xml

<default-web-app application="default" name="jira" root="/jira"/>

Now Create a INDEX directory for JIRA to use

mkdir /opt/jira/index

Now build jira

/opt/jira/build.sh

Orion can't read WAR files so you need to uncompress it.

cd /opt/jira/dist-generic

unzip atlassian-jira-3.4.3.war

Now Change the permmissions on the jira directory and sub folders/files so you orion is the owner

chown orion.orion /opt/jira -R

Then run the startup script or reboot for it to run automatically! 

su - orion -c /opt/orion/sbin/start_orion.sh

CONGRATUALTIONS YOU NOW HAVE A RUNNING JIRA SERVER!

These instructions were provided by:
Robert Mitchell
Merkle Inc.
ramitchell@merklenet.com

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