java.lang.RuntimeException: Cell: merge of Cells of different dataLens cellNum

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Problem

The indexing of a SVN repository pauses, and the following can be seen in the repository Summary, under Recent Errors:

Repository paused due to error com.cenqua.fisheye.rep.RepositoryClientException: com.cenqua.fisheye.rep.DbException: java.io.IOException: InfinityDB has been subject to an Internal Exception. Use close() or rollBack(). (Cell: merge of Cells of different dataLens cellNum: 525) File=/atlassian/data/fecru/var/cache/ssr-76xx/revcache/data.bin com.cenqua.fisheye.rep.DbException: java.io.IOException: InfinityDB has been subject to an Internal Exception. Use close() or rollBack(). (Cell: merge of Cells of different dataLens cellNum: 525) File=/atlassian/data/fecru/var/cache/ssr-76xx/revcache/data.bin java.io.IOException: InfinityDB has been subject to an Internal Exception. Use close() or rollBack(). (Cell: merge of Cells of different dataLens cellNum: 525) File=/atlassian/data/fecru/var/cache/ssr-76xx/revcache/data.bin java.lang.RuntimeException: Cell: merge of Cells of different dataLens cellNum: 525


Cause

This is caused by repository corruption that can come from many sources including disk failure, antivirus software and manual file system modifications. 

Resolution

Perform a complete re-index with the following steps:

  1. Navigate to FishEye administration page Repository Settings > Repositories
  2. Select the repository under the Name column
  3. Select the Maintenance link
  4. Select Start for Re-clone and Re-index

Please note that if this is a large repository it could take a long time to index. It's possible to reduce this time with the steps in How to reindex a single repository on a test server.



Last modified on Jun 5, 2019

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