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To customise Confluence's PDF output, you can edit the CSS stylesheets used by the PDF exporter. See Customising Exports to PDF.
To customise the HTML output, you will need to modify the file confluence-x.y.z-jar/com/atlassian/confluence/pages/Page.htmlexport.vm. See How Do I Edit Files In Confluence JAR Files? to learn how to repackage this file.
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